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  • 2009:
    • Fu X, Fu N, Guo S, Yan Z, Xu Y, Hu H, Menzel C, Chen W, Li Y, Zeng R, Khaitovich P. (2009) Estimating accuracy of RNA-Seq and microarrays with proteomics. BMC Genomics 10(1):161
    • Somel M, Franz H, Yan Z, Lorenc A, Guo S, Giger T, Kelso J, Nickel B, Dannemann M, Bahn S, Webster MJ, Weickert CS, Lachmann M, Pääbo S, Khaitovich P. (2009) Transcriptional neoteny in the human brain. Proc Natl Acad Sci U S A 106(14):5743-8.
  • 2008:
    • Farkas LM, Haffner C, Giger T, Khaitovich P, Nowick K, Birchmeier C, Pääbo S, Huttner WB. (2008) Insulinoma-associated 1 has a panneurogenic role and promotes the generation and expansion of basal progenitors in the developing mouse neocortex. Neuron 9;60(1):40-55
    • Chaix R, Somel M, Kreil DP, Khaitovich P, Lunter GA. (2008) Evolution of primate gene expression: drift and corrective sweeps? Genetics 180(3):1379-89
    • Khaitovich P, Lockstone HE, Wayland MT, Tsang TM, Jayatilaka SD, Guo AJ, Zhou J, Somel M, Harris LW, Holmes E, Pääbo S, Bahn S. (2008) Metabolic changes in schizophrenia and human brain evolution. Genome Biol. 9(8):R124.
    • Bonnefont J, Nikolaev SI, Perrier AL, Guo S, Cartier L, Sorce S, Laforge T, Aubry L, Khaitovich P, Peschanski M, Antonarakis SE, Krause KH. (2008) Evolutionary forces shape the human RFPL1,2,3 genes toward a role in neocortex development. Am J Hum Genet. 83(2):208-18.
    • Somel M, Creely H, Franz H, Mueller U, Lachmann M, Khaitovich P, Pääbo S. (2008) Human and chimpanzee gene expression differences replicated in mice fed different diets. PLoS ONE 3(1):e1504.
  • 2007:
    • Khaitovich P. (2007) Brain expression--is it all in our SNPs? Mol Syst Biol. 3:155
    • Fu, N., Drinnenberg, I., Kelso, J., Wu, J.R., Paabo, S., Zeng, R., and Khaitovich, P. (2007). Comparison of protein and mRNA expression evolution in humans and chimpanzees. PLoS ONE 2, e216. [PDF]
    • Prufer, K., Muetzel, B., Do, H.H., Weiss, G., Khaitovich, P., Rahm, E., Paabo, S., Lachmann, M., and Enard, W. (2007). FUNC: a package for detecting significant associations between gene sets and ontological annotations. BMC Bioinformatics 8, 41. [PDF]
  • 2006:
    • Somel, M., Khaitovich, P., Bahn, S., Paabo, S., and Lachmann, M. (2006). Gene expression becomes heterogeneous with age. Curr Biol 16, R359-360. [PDF]
    • Khaitovich, P., Tang, K., Franz, H., Kelso, J., Hellmann, I., Enard, W., Lachmann, M., and Paabo, S. (2006). Positive selection on gene expression in the human brain. Curr Biol 16, R356-358. [PDF]
    • Khaitovich, P., Kelso, J., Franz, H., Visagie, J., Giger, T., Joerchel, S., Petzold, E., Green, R.E., Lachmann, M., and Paabo, S. (2006). Functionality of intergenic transcription: an evolutionary comparison. PLoS Genet 2, e171. [PDF]
    • Khaitovich, P., Enard, W., Lachmann, M., and Paabo, S. (2006). Evolution of primate gene expression. Nat Rev Genet 7, 693-702. [PDF]
    • Creely, H., and Khaitovich, P. (2006). Human brain evolution. Prog Brain Res 158, 295-309. [PDF]
  • 2005:
    • Yohn, C.T., Jiang, Z., McGrath, S.D., Hayden, K.E., Khaitovich, P., Johnson, M.E., Eichler, M.Y., McPherson, J.D., Zhao, S., Paabo, S., et al. (2005). Lineage-Specific Expansions of Retroviral Insertions within the Genomes of African Great Apes but Not Humans and Orangutans. PLoS Biol 3, 1-11. [PDF]
    • Khaitovich, P., Paabo, S., and Weiss, G. (2005). Toward a neutral evolutionary model of gene expression. Genetics 170, 929-939. [PDF]
    • Khaitovich, P., Hellmann, I., Enard, W., Nowick, K., Leinweber, M., Franz, H., Weiss, G., Lachmann, M., and Paabo, S. (2005). Parallel patterns of evolution in the genomes and transcriptomes of humans and chimpanzees. Science 309, 1850-1854. [PDF]
    • Heissig, F., Krause, J., Bryk, J., Khaitovich, P., Enard, W., and Paabo, S. (2005). Functional analysis of human and chimpanzee promoters. Genome Biol 6, R57. [PDF]
    • Fraser, H.B., Khaitovich, P., Plotkin, J.B., Paabo, S., and Eisen, M.B. (2005). Aging and Gene Expression in the Primate Brain. PLoS Biol 3, e274. [PDF]
    • Franz, H., Ullmann, C., Becker, A., Ryan, M., Bahn, S., Arendt, T., Simon, M., Paabo, S., and Khaitovich, P. (2005). Systematic analysis of gene expression in human brains before and after death. Genome Biol 6, R112. [PDF]
    • Cheng, Z., Ventura, M., She, X., Khaitovich, P., Graves, T., Osoegawa, K., Church, D., DeJong, P., Wilson, R.K., Paabo, S., et al. (2005). A genome-wide comparison of recent chimpanzee and human segmental duplications. Nature 437, 88-93. [PDF]

The complete publication list can be found here.

  
 
   
2007 Comparative Biology Group