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Full list of publications from PubMed
1. Chernyaeva, N.S., Khaitovich, F . and Aseev, V.V. (1995)
Dissociation of the Crithidia fasciculata large ribosomal
subunit containing discontinuous 28S rRNA. Molecular Biology
1995,29, 774-777.
2. Chernyaeva, N.S., Khaitovich, F . and Aseev, V.V. (1995) ,
Dissociation of ribosomes from flagellated protozoan Astasia
longa containing discontinuous rRNA. Biochemistry (Moscow) 1995,
60, 575-579.
3. Khaitovich, P., Tenson, T., Mankin, A.S. and Green, R.
(1999). Peptidyl transferase activity catalyzed by protein-free
23S ribosomal RNA remains elusive. RNA, 5, 605-608.
4. Khaitovich, P., Tenson, T., Kloss, P. and Mankin, A.S.
(1999). Reconstitution of functionally active Thermus aquaticus
large ribosomal subunits with in vitro transcribed rRNA.
Biochemistry, 38, 1789-1788.
5. Khaitovich, P., Mankin, A..S., Green, R., Lancaster, L.,
Noller, H.F. (1999). Characterization of functionally active
subribosomal particles from thermus aquaticus. Proc Natl Acad
Sci U S A, 96, (1), 85-90.
6. Khaitovich, P. and Mankin, A.S. (1999). Effect of antibiotics
on large ribosomal subunit assembly reveals possible function of
5S rRNA. J. Mol. Biol., 291, (5), 1025-1034.
7. Khaitovich, P. and Mankin, A.S. (2000). Reconstitution of the
50S with an in vitro transcript: a new tool to study peptidyl
transferase. Book chapter in "The Ribosome. Structure, Function
Antibiotics and Cellular Interactions". Edited by Garet, R. A.
et al., ASM Press Washington DC, 229-243.
8. Enard, W., Khaitovich, P., Klose, J., Zollner, S., Heissig,
F., Giavalisco, P., Nieselt-Struwe, K., Muchmore, E., Varki, A.,
Ravid, R., Doxiadis, G.M., Bontrop, R.E., Paabo, S. (2002).
Intra- and interspecific variation in primate gene expression
patterns. Science, 296(5566), 340-343.
9. Sakaki, Y., Watanabe, H., Taylor, T., Hattori, M., Fujiyama,
A., Toyoda, A., Kuroki, Y., Itoh, T., Saitou, N., Oota, S., Kim,
C. G., Kitano, T., Lehrach, H., Yaspo, M.L., Sudbrak, R., Kahla,
A., Reinhardt, R., Kube, M., Platzer, M., Taenzer, S., Galgoczy,
P., Kel, A., Bloecker, H., Scharfe, M., Nordsiek, G., Hellmann,
I., Khaitovich, P., Paabo, S., Chen, Z., Wang, S. Y., Ren, S.X.,
Zhang, X.L., Zheng, H.J., Zhu, G. F., Wang, B. F., Zhao, G.P.,
Tsai, S.F., Wu, K., Liu, T.T., Hsiao, K.J., Park, H.S., Lee, Y.S.,
Cheong, J.E. & Choi, S.H. (2003). Human versus chimpanzee
chromosome-wide sequence comparison and its evolutionary
implication. Cold Spring Harb Symp Quant Biol 68, 455-60.
10. Khaitovich, P., Weiss, G., Lachmann, M., Hellmann, I., Enard,
W., Muetzel, B., Wirkner, U., Ansorge, W. & Paabo, S. (2004). A
neutral model of transcriptome evolution. PLoS Biol 2, E132.
11. Khaitovich, P., Muetzel, B., She, X., Lachmann, M.,
Hellmann, I., Dietzsch, J., Steigele, S., Do, H.H., Weiss, G.,
Enard, W., Heissig, F., Arendt, T., Nieselt-Struwe, K., Eichler,
E.E. and Paabo, S. (2004). Regional patterns of gene expression
in human and chimpanzee brains. Genome Res 14, 1462-73.
12. Watanabe, H., Fujiyama, A., Hattori, M., Taylor, T.D.,
Toyoda, A., Kuroki, Y., Noguchi, H., BenKahla, A., Lehrach, H.,
Sudbrak, R., Kube, M., Taenzer, S., Galgoczy, P., Platzer, M.,
Scharfe, M., Nordsiek, G., Blocker, H., Hellmann, I., Khaitovich,
P., Paabo, S., Reinhardt, R., Zheng, H.J., Zhang, X.L., Zhu, G.F.,
Wang, B.F., Fu, G., Ren, S.X., Zhao, G.P., Chen, Z., Lee, Y.S.,
Cheong, J. E., Choi, S.H., Wu, K.M., Liu, T. T., Hsiao, K.J.,
Tsai, S.F., Kim, C.G., S, O.O., Kitano, T., Kohara, Y., Saitou,
N., Park, H.S., Wang, S.Y., Yaspo, M.L. & Sakaki, Y. (2004). DNA
sequence and comparative analysis of chimpanzee chromosome 22.
Nature 429, 382-8.
13. Yohn, C.T., Jiang, Z., McGrath, S.D., Hayden, K.E.,
Khaitovich, P., Johnson, M.E., Eichler, M.Y., McPherson, J.D.,
Zhao, S.S., Paabo, S. and Eichler E.E. (2005). A Retroviral
Invasion of Great-Ape Genomes that spared Humans and Orangutans:
A retroviral crisis speciation model. PLoS Biol. 4:e110.
14. Khaitovich, P., Paabo, S. and Weiss, G. (2005). Towards a
neutral evolutionary model of gene expression. Genetics, 170(2),
929-39.
15. Khaitovich, P., Hellmann, I., Enard, W., Nowick, K.,
Leinweber, M., Franz, H., Weiss, G., Lachmann, M. and Pääbo, S.
(2005). Parallel patterns of evolution in the genomes and
transcriptomes of humans and chimpanzees. Science, 309(5742),
1850-4.
16. Heissig, F., Krause, J., Bryk, J., Khaitovich, P., Enard, W.
and Paabo, S. (2005). Functional analysis of human and
chimpanzee promoters, Genome Biology, 6(7):R57.
17. Fraser, H.B., Khaitovich, P., Plotkin, J.B., Pääbo, S.,
Eisen M.B. (2005). Aging and gene expression in the primate
brain. PLoS Biol. 3(9):e274.
18. Cheng, Z., Ventura, M., She, X., Khaitovich, P., Graves, T.,
Osoegawa, K., Church, D., DeJong, P., Wilson, R.K., Paabo, S.,
Rocchi, M. and Eichler E.E. (2005). A Genome-wide Comparison of
Recent Human and Chimpanzee Segmental Duplications. Nature,
437(7055), 88-93.
19. Franz, H., Ullmann, C., Becker, A., Ryan, M., Bahn, S.,
Arendt, T., Paabo, S., Khaitovich, P. (2005). Systematic
analysis of gene expression in human brains before and after
death. Genome Biol. 6(13):R112.
20. Somel, M., Khaitovich, P., Bahn, S., Paabo, S., Lachmann,
M. (2006). Gene expression becomes heterogeneous with age.
Curr Biol. 16(10):R359-60.
21. Khaitovich, P., Tang, K., Franz, H., Kelso, J., Hellmann,
I., Enard, W., Lachmann, M., Paabo, S. (2006). Positive
selection on gene expression in the human brain. Curr Biol. 2006
May 23;16(10):R356-8.
22. Khaitovich, P., Enard, W., Lachmann, M., Paabo, S. (2006).
Evolution of primate gene expression. Nat Rev Genet. 7(9),
693-702.
23. Khaitovich P, Kelso J, Franz H, Visagie J, Giger T, Joerchel S, Petzold E, Green RE, Lachmann M, Paabo S. (2006).
Functionality of intergenic transcription: an evolutionary comparison. PLoS Genet. 13;2(10):e171.
24. Fu N, Drinnenberg I, Kelso J, Wu JR, Paabo S, Zeng R, Khaitovich P. (2007).
Comparison of protein and mRNA expression evolution in humans and chimpanzees. PLoS ONE. 14;2(2):e216.
25. Somel M, Creely H, Franz H, Mueller U, Lachmann M, Khaitovich P, Paabo S. (2008).
Human and chimpanzee gene expression differences replicated in mice fed different diets. PLoS ONE. 3(1):e1504.
26. Khaitovich P, Lockstone HE, Wayland MT, Tsang TM, Jayatilaka SD, Guo AJ, Zhou J, Somel M, Harris LW, Holmes E, P妸bo S, Bahn S. (2008).
Metabolic changes in schizophrenia and human brain evolution. Genome Biol. 9(8):R124.
27. Chaix R, Somel M, Kreil DP, Khaitovich P, Lunter GA. (2008).
Evolution of primate gene expression: drift and corrective sweeps? Genetics. 180(3):1379-89.
28. Farkas LM, Haffner C, Giger T, Khaitovich P, Nowick K, Birchmeier C, P妸bo S, Huttner WB. (2008).
Insulinoma-associated 1 has a panneurogenic role and promotes the generation and expansion of basal progenitors in the developing mouse neocortex. Neuron. 60(1):40-55.
29. Somel M, Franz H, Yan Z, Lorenc A, Guo S, Giger T, Kelso J, Nickel B, Dannemann M, Bahn S, Webster MJ, Weickert CS, Lachmann M, P妸bo S, Khaitovich P. (2009).
Transcriptional neoteny in the human brain. Proc Natl Acad Sci U S A. 106(14):5743-8.
30. Fu X, Fu N, Guo S, Yan Z, Xu Y, Hu H, Menzel C, Chen W, Li Y, Zeng R, Khaitovich P. (2009).
Estimating accuracy of RNA-Seq and microarrays with proteomics. BMC Genomics. 10(1):161.
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