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 朱新广 研究员 研究组长 博士生导师

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2013年获Melvin Calvin-Andrew Benson Award


1. Jiajia Xu, Andrea Bräutigam, Yuanyuan Li, Andreas P. M. Weber and Xin-Guang Zhu (2016).  Systems analysis of cis-regulatory motifs in C4 photosynthesis genes using maize and rice leaf transcriptomic data during a process of de-etiolation. Journal of Experimental Botany. doi: 10.1093/jxb/erw275. 

2. Chensi Cao, Jiajia Xu, Guangyong Zheng, Xin-Guang Zhu (2016). Evidence for the role of transposons in the recruitment of cis-regulatory motifs during the evolution of C4 photosynthesis. BMC Genomics 17:201 

3. Jemaa Essemine, Mingnan Qu, Hualing Mi and Xin-Guang Zhu (2016) Response of chloroplast NAD(P)H dehydrogenase-mediated cyclic electron flow to a shortage or lack in ferredoxin-quinone oxidoreductase-dependent pathway in rice following short-term heat stress. Frontiers in Plant Science 7: 383 doi: 10.3389/fpls.2016.00383

4. Mingnan Qu, Saber Hamdani, Wenzhen Li, Shimei Wang, Jiuyou Tang, Zhuo Chen, Qingfeng Song, Ming Li, Honglong Zhao, Tiangen Chang, Chengcai Chu and Xin-Guang Zhu (2016) Rapid stomatal response to fluctuating light: an under-explored mechanism to improve drought tolerance in rice. Functional Plant Biology 43, 727-738

5. Qing-Feng Song, Han Xiao, Xianglin Xiao, Xin-Guang Zhu (2016) A new canopy photosynthesis and transpiration measurement system (CAPTS) for canopy gas exchange research. Agricultural and Forest Meteorology 217:101-107. 

6. Xin-Guang Zhu, Jonathan P. Lynch, David S. LeBauer, Andrew J. Millar, Mark Stitt, Stephen P. Long (2015). Plants in silico: need, vision and framework -- An integrative platform for plant systems biology research. Plant Cell and Environment DOI: 10.1111/pce.12673.

7. Donald R. Ort, Sabeeha S. Merchant, Jean Alric, Alice Barkan, Robert E. Blankenship, Ralph Bock, Roberta Croce, Maureen R. Hanson, Julian Hibberd, Derek L. Lindstrom, Stephen P. Long, Thomas A. Moore, James Moroney, Krishna K. Niyogi, Martin Parry, Pamela Peralta-Yahya, Roger Prince, Kevin Redding, Martin Spalding, Klaas van Wijk, Wim F.J. Vermaas, Susanne von Caemmerer, Andreas Weber, Todd Yeates, Joshua Yuan, Xin-Guang Zhu (2015) Redesigning photosynthesis to sustainably meet global food and bioenergy demand. PNAS, 112(28):8529-36. 

8. Ming-Ju Amy Lyu, Udo Gowik, Steve Kelly, Sarah Covshoff, Julia Mallmann, Peter Westhoff, Julian M. Hibberd, Matt Stata, Rowan F. Sage, Haorong Lu, Xiaofeng Wei, Gane Ka-Shu Wong, Xin-Guang Zhu (2015) RNA-Seq based phylogeny recapitulates previous phylogeny of the genus Flaveria (Asteraceae) with some modifications. BMC Evolutionary Biology, 15:116. 

9. Stephen P. Long, Amy Marshall-Colon and Xin-Guang Zhu (2015) Meeting the global food demand of the future by engineering crop photosynthesis and yield potential. Cell 161: 56-66. 

10. Changpeng Xin, Danny Tholen, Xin-Guang Zhu (2015) The benefit of photorespiratory bypass – How can they work? Plant Physiology 167: 574-585.

11. Xianbin Yu, Guangyong Zheng, Lanlan Shan, Guofeng Meng, Martin Vingron, Qi Liu, Xin-Guang Zhu (2014) Reconstruction of gene regulatory network related to photosynthesis in Arabidopsis thaliana. Frontiers in Plant Sciences (SI on Plant Systems Biology). doi: 10.3389/fpls.2014.00273.

12. Yuanyuan Li, Jiajia Xu, Noor UI Haq, Hui Zhang, Xin-Guang Zhu (2014) Was low CO2 a driving force of C4 evolution? Arabidopsis responses to long-term low CO2 stress? Journal of Experimental Botany 65: 3657-67.

13. Yu Wang, Stephen P Long, Xin-Guang Zhu (2014) Elements required for an efficient NADP-ME type C4 photosynthesis. Plant Physiology 164: 2231-2246.

14. Yu Wang, Andrea Bräutigam, Andreas PM Weber, Xin-Guang Zhu (2014) Three distinct biochemical subtypes of C4 photosynthesis? A modeling analysis. Journal of Experimental Botany 65:3567-78.

15. Changpeng Xin, Jin Yang,  Xin-Guang Zhu (2013) A model of chlorophyll a fluorescence induction kinetics with explicit description of structural constraints of individual photosystem II units. Photosynthesis Research 117: 339-354.

16. Mercedes Xu,Yuanyuan Li, Hui Zhang, Sisi Wang, Ye Tian, Xin-Guang Zhu (2013) Whole transcriptome analysis using next-generation sequencing of model species Setaria viridis to support C4 photosynthesis research. Plant Molecular Biology 83: 77-87.

17. Qingfeng Song, Guilian Zhang, Xin-Guang Zhu (2013) Optimal crop canopy architecture to maximise canopy photosynthetic CO2 uptake under elevated CO2 – a theoretical study using a mechanistic model of canopy photosynthesis. Functional Plant Biology 40: 108-124.

18. Xin-Guang Zhu, Yu Wang, Donald R Ort and Stephen P Long (2012) e-Photosynthesis: a comprehensive dynamic mechanistic model of C3 photosynthesis: from light capture to sucrose synthesis. Plant Cell & Environment 36:1711-27.

19. Danny Tholen, Carolina Boom, Xin-Guang Zhu (2012) Opinion: prospects for improving photosynthesis by altering leaf anatomy. Plant Science 197: 92-101.

20. Danny Tholen, Gilbert Ethier, Steeve Pepin, Bernard Genty, Xin-Guang Zhu (2012). Variable mesophyll conductance revisited -- theoretical background and experimental implications. Plant Cell & Environment 35: 2087-103.

21. Xin-Guang Zhu, Qingfeng Song, Donald R Ort (2012) Elements of a dynamic systems model of canopy photosynthesis. Current Opinion in Plant Biology 15: 237-44.

22. Rowan Sage, Xin-Guang Zhu (2011) Exploiting the engine of C4 photosynthesis. Journal of Experimental Botany 62:2989-3000.

23. Vivek Thakur, Samart Wanchana, Mercedes Xu, Richard Bruskiewich, William Paul Quick, Axel Mosig, Xin-Guang Zhu (2011) Characterization of parameters in plant microRNA prediction. BMC Genomics 12:108.

24. Danny Tholen, Xin-Guang Zhu (2011) The mechanistic basis of internal conductance – A theoretical analysis using a 3D reaction diffusion model of mesophyll cell photosynthesis. Plant Physiology 156:90-105.

25. Xin-Guang Zhu, Guilian Zhang, Danny Tholen, Yu Wang, Changpeng Xin, Qingfeng Song (2011) The next generation models for crops and agro-ecosystems. Science China: Information Sciences 54(3) 1-9.


    教育经历 & 学术背景  

2008年8月至今任中科院-马普学会计算生物学伙伴研究所研究员, 青年科学家小组组长。