Recent Selected Publications
Brutnell TB, Wang L, Swartwood K, Goldschmidt A, Jackson D, Zhu XG, Kellogg E, Van Eck J. Setaria viridis: a model for C4 photosyntheis (2010). Plant Cell (In press)
Zhu XG, Shan LL, Y Wang, WP Quick (2010) C4 Rice -- an arena for systems biology research. Journal of Integrative Plant Biology (In press, invited perspective paper).
Liu Q, Yang Y, Zhang ZL, Li YX, Zhu XG (2010) Identifying cooperative transcription factors by combining ChIP-chip data and knockout data. Cell Research (In press)
Zhu X-G, Zhang G, Tholen D, Wang Y, Xin C, Song Q. The Next Generation Models for Crops and Agro-Ecosystems (2010). Science China (In press, invited perspective paper)
Parry MAJ, Reynolds M, Salvucci ME, Raines C, Andralojc PJ, Zhu XG, Price D, Furbank R（2010）Wheat yield consortia: Strategies to increase photosynthesis Journal of Experimental Botany (In press)
Zhu X-G (2010). Systems-level modeling—A new approach for engineering efficient photosynthetic machinery. Journal of Biotechnology (In press).
Zhu X-G, Long SP, Ort DR (2010). Improving photosynthetic efficiency for greater yield. Annual Review of Plant Biology, 61 .
Miguez FE, Zhu X-G, Humphries, S, Bollero G, Long SP (2009). Parameterization and validation of WIMOVAC for photosynthesis and biomass modeling in Miscanthus giganteus . Global Change Biology – Biofuels 1: 282-296.
Wang Z, Zhu X-G, Li YY, Chang X, Chen YZ, Li YX, Liu L (2009). Though with constraints imposed by endosymbiosis, preferential attachment is still a plausible mechanism responsible for evolution of chloroplast metabolic network. Journal of Evolutionary Biology 22: 71-79
Chen CP, Zhu X-G, Long SP (2008). The effect of leaf-level spatial variability in photosynthetic capacity on biochemical parameter estimates using the Farquhar et al. (1980) model: a theoretical approach. Plant Physiology 148:1139-1147.
Zhu X-G, Long SP, Ort DR (2008) What is the maximum efficiency with which photosynthesis can convert solar energy into biomass? Current Opinion in Biotechnology 19: 153-9 (PDF).
Zhu X-G, de Sturler E, Alba R (2008). A simple model of the Calvin cycle has only one physiologically feasible steady state under the same external condition. Nonlinear Analysis 4 (PDF).
Chen C-C, Zhu X-G and Zhong S (2008) Selection of thermodynamic models for combinatorial control of multiple transcription factors in early differentiation of embryonic stem cells. BMC Genomics (Technical report).
Wang SW and Zhu X-G (2008) Coupling cyberinfrastructure and GIS to empower ecological and environmental research. Bioscience 58: 6-7 (PDF).
Zhu X-G , de Sturler E, Long SP (2007) Optimized distribution of carbon metabolism enzymes can dramatically increase photosynthetic CO2 uptake rate. - Theoretical explorations using a complete model of photosynthetic carbon metabolism. Plant Physiology 145: 513-526 (PDF).
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